The monorail glides out of Naha with the green hills of the main island behind it, and somewhere between the old streets of Kokusai-dori and the airport platform, the question comes up: how do you reach the islands that sit even farther out? Ishigaki, the gateway to the Yaeyama Islands, lies well beyond Okinawa’s main island, and you reach it by air. From Naha Airport you fly to New Ishigaki Airport, and the rest of the trip begins there.

How do you get from Naha to Ishigaki?
You fly from Naha Airport to New Ishigaki Airport, and that single hop is the whole journey between the two cities. Ishigaki is an island city, so there is no train or road to follow from Naha. The monorail in Naha stays on the main island, and the planes do the crossing.
The trip falls into three simple parts: getting to Naha Airport, flying, and finding your way out of the airport on Ishigaki. Each has its own rhythm, and the middle one is the shortest in effort, since you board, settle in and watch the East China Sea slide beneath the wing.
Starting at Naha Airport
Naha Airport is the gateway to all of Okinawa’s islands, so the terminal is used to travelers heading onward to smaller places. It is a public and military airport run by Japan’s Ministry of Land, Infrastructure, Transport and Tourism, and it operates 24 hours a day, seven days a week. That matters if your plans include an early departure or a late arrival.
Visitors reach the terminal by the Okinawa Urban Monorail, known as Yui Rail, which runs from Naha Airport Station to the center of Naha and on to Tedako-Uranishi Station in Urasoe. Buses also leave the airport for many parts of Okinawa Island. If your hotel sits on the Kokusai-dori side of town, the monorail is the line you will already know from your first day.
Landing on Ishigaki
New Ishigaki Airport serves Ishigaki city, which includes Ishigaki Island and is the political, cultural and economic center of the Yaeyama Islands. The island has about 49,000 inhabitants, so you arrive in a real town with shops, markets and an everyday rhythm of its own, not at a resort outpost.
From here, travelers fan out across the Yaeyama Islands, and Ishigaki’s own food is worth a stop before you go. Look for Yaeyama soba, island vegetables in the stir-fries called champuru, and Ishigaki beef grilled at yakiniku counters in town. A bowl of shaved ice topped with brown sugar syrup is a common reward after a day in the sun.
| Starting point | Departure airport | Arrival airport |
|---|---|---|
| Naha | Naha Airport | New Ishigaki Airport |
| Tokyo | Haneda Airport | New Ishigaki Airport |
Which options are there?
Both end at the same place, New Ishigaki Airport. That keeps the choice simple: you are choosing where you start, not which way to cross.
Flying from Naha
Ishigaki Island can be reached from Naha Airport, which is why the city is a natural pairing with a stay on the main island. Naha Airport is Japan’s sixth busiest airport, with domestic flights from dozens of cities, including low-cost carriers, and scheduled international traffic to Taiwan, Hong Kong, South Korea, Thailand, Malaysia, Singapore and mainland China.
The airport is also the hub for Japan Transocean Air and Ryukyu Air Commuter, two carriers that tie Okinawa’s islands together. Because the terminal runs around the clock, there is no fixed moment when the airport shuts its doors, though the flights themselves keep their own schedules.
Coming from Tokyo through Haneda
Haneda Airport in Tokyo also connects to Ishigaki Island, so you can reach the island without stopping in Naha at all. The distance is considerable, since Ishigaki is the southernmost city in Japan, about 1243 miles from Tokyo.
For a traveler who has already spent time on Okinawa’s main island, this means the Naha route is the one that fits an island-hopping plan. For someone starting in Tokyo and heading straight to the Yaeyama Islands, Haneda works on its own.
Getting to the airport in Naha
Naha has the only public rail network in Okinawa, the Yui Rail monorail, and it is the line that links the center of the city to the terminal. It is a ride travelers take at the start or end of a stay, with views over rooftops and the harbor as it runs through the city.
Bus service from the airport serves many parts of the main island, which suits anyone based outside the city. Naha is the largest city in Okinawa and is home to about 21% of the main island’s residents, so a good share of the island’s traffic funnels toward the airport.
What should you know before you travel from Naha to Ishigaki?
The main thing to know is that Ishigaki has a New Ishigaki Airport, which opened on March 7, 2013, and that it replaced an older airport. Any older photo, map or story that mentions the first airport describes a place that no longer handles flights.
The old airport and the new one
Commercial operations at the original Ishigaki Airport ended at midnight on March 6, 2013, and the new airport took over the next day. The old field had begun as a military airstrip in 1943 and became a civilian airport in 1956. Its runway could not take planes larger than a Boeing 737, and the site, hemmed in by the growing town, was not suited to expansion.
Construction of the new airport started in October 2006. For you, the practical point is simply to head for New Ishigaki Airport, the one that serves the city today.
On the ground in Ishigaki
Traffic in Japan moves on the left side of the road, and anyone who has not driven that way will notice it at the first intersection. Road signs are written in Japanese, and if you do not read it, they can be hard to follow, so travelers on foot or by bus often have an easier time with place names matched to a map.
Japanese trains have a reputation for running exactly on time, and the same spirit of precision shapes how travelers plan their days across the country. On Ishigaki, the pace changes. The island runs on a slower clock, and people build in a free afternoon for the market or the water.
Planning around the time you land
Because Naha Airport operates all day and night, early and late flights are part of the picture on the Okinawa side. Overnight cargo flights also pass through the airport in the small hours, so the terminal is never entirely still.
You might spend the first days in Naha, eating at the market stalls and walking its streets, then fly south to a town on Ishigaki with a different dialect, different dishes and a different rhythm.
Good to know before you go
Ishigaki is a town with its own food, its own markets and its own pace, so it helps to arrive with a flexible plan and an appetite. Weather over the islands can change a day’s schedule, and flights between islands follow it, so leave some room in your plans on both ends of the hop from Naha.
Sources
- Wikipedia, Ishigaki Airport (https://en.wikipedia.org/wiki/Ishigaki_Airport), checked October 11, 2026
- Wikipedia, Naha Airport (https://en.wikipedia.org/wiki/Naha_Airport), checked October 11, 2026
- Japan National Tourism Organization, Okinawa (https://www.japan.travel/en/destinations/okinawa/okinawa/naha-and-the-main-island/), checked October 11, 2026
- Okinawa Churaumi Aquarium (https://churaumi.okinawa/en/), checked October 11, 2026
- Japan National Tourism Organization, Ishigaki (https://www.japan.travel/en/destinations/okinawa/okinawa/ishigaki-island-and-around/), checked October 11, 2026
- Wikipedia, Ishigaki, Okinawa (https://en.wikipedia.org/wiki/Ishigaki,_Okinawa), checked October 11, 2026
- U.S. Department of State, Japan travel information, travel and transportation (https://travel.state.gov/content/travel/en/international-travel/International-Travel-Country-Information-Pages/Japan.html), checked October 11, 2026
- Japan National Tourism Organization, trains and buses (https://www.japan.travel/en/guide/how-to-travel-by-train-and-bus-in-japan/), checked October 11, 2026
- Japan National Tourism Organization, traveling by rail (https://www.japan.travel/en/guide/traveling-by-rail/), checked October 11, 2026
To plan your stay
- Best Time to Visit Japan: Cherry Blossoms, Autumn Colors, Weather and Festivals
- Things to Do in Japan: Kyoto Temples, Onsen, Street Food and Day Trips
- Where to Stay in Japan: Ryokan, Temple Stays, Capsule Hotels and the Best Cities to Base In
- Know Before You Go to Japan: Entry, Money, Etiquette and Getting Around